Title : Phalaenopsis Equestris Genome
Link : Phalaenopsis Equestris Genome
Phalaenopsis Equestris Genome
The whole genome. We report the 31 gb draft genome assembly of an important winter flowering phalaenopsis khm190 cultivar.
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Interestingly the intron length is greater than expected.
Phalaenopsis equestris genome.
Phalaenopsis equestris is the first of the various orchid species to be sequenced.
Found from the philippines and southern taiwan as a small sized epiphyte near streams in hot valleys at an altitude of sea level to 300 meters.
Phalaenopsis equestris has a moderately large genome of 1 gb with approximately 30000 predicted genes which is a fairly typical number for an angiosperm.
Equestris root stem leaf and flower samples.
To aid in their annotation of the genome and gene expression profiling of the plant the researchers also generated rna sequence data on p.
We generated 895 gb rna seq and 113 million srna seq reads to use these data to identify 41153 protein coding genes and 188 mirna families.
This fact suggests that the tcp family did not expand along with genome expansion of p.
In the process the team generated more than 119 billion bases of sequence data which it used to assemble a 1086 billion base draft assembly for p.
This genus is characterized by its massive divergence and wide variety with adaptations to the various climitalogical regions and polinators.
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Here we present the genome sequence of the tropical epiphytic orchid phalaenopsis equestris a frequently used parent species for orchid breeding.
Equestris is the first plant with crassulacean acid metabolism cam for which the genome.
Phalaenopsis equestris is an orchid species identified by schauer rchbf.
The first whole genome sequence of the orchid phalaenopsis equestris was published in 2015 51 and the number of orchid genomes has continuously increased 5253545556.
Equestris during orchid evolution cai et al 2015.
Although the genome size of phalaenopsis is larger than that of arabidopsis and riceapproximately 9 and 28 times respectivelythe number of genes among the genomes is similar cai et al 2015.
Phalaenopsis equestris is one of the thousands species present within the orchid genus.
Zhong jian liu lai qiang huang yi bo luo hong hwa chen and yves van de peer report the first genome sequence of a crassulacean acid metabolism cam plant the orchid phalaenopsis equestris.
The phalaenopsis orchid is an important potted flower of high economic value around the world.
Phalaenopsis Equestris Genome
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